MolNFT v1 · #11321 · protein

Crystal structure of monoclinic lysozyme grown at pH 4.6

1JJ3: “Crystal structure of monoclinic lysozyme grown at pH 4.6”. X-ray diffraction, 2 pockets (best druggability 0.33). MolNFT v1 #11321 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1JJ3
Type: protein
Length: 258 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Lysozyme
EC: 3.2.1.17
UniProt: P00698
Pockets: 2 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 11% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Lysozyme (EC 3.2.1.17)	protein	129	41% helix, 11% strand	P00698

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	76	0.33	0.75	16	empty
2	61	0.31	0.75	17	empty

Modifications

Observed in the structure: 8 disulfide (disulfide).

Compared structures

1JJ3 · Crystal structure of monoclinic lysozyme grown at pH 4.6 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P00698
Elsewhere: RCSB PDB 1JJ3 · PDBe 1JJ3 · UniProt P00698

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