MolNFT v1 · #113128 · protein
Hydrolytic potential of the ammonia-oxidizing thaumarchaeon nitrososphaera gargenis - crystal structure and activity profiles of carboxylesterases linked to their metabolic function
5A62 · Putative ALPHA/BETA hydrolase fold protein: “Hydrolytic potential of the ammonia-oxidizing thaumarchaeon nitrososphaera gargenis - crystal structure and…”. X-ray diffraction, 1 pocket (best druggability 0.68). MolNFT v1 #113128 on…
- PDB
- 5A62
- Type
- protein
- Length
- 272 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative ALPHA/BETA hydrolase fold protein
- UniProt
- K0IM51
- Pockets
- 1 · best druggability 0.68
Structure
x-ray diffraction · 1 distinct chain · 49% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative ALPHA/BETA hydrolase fold protein | protein | 272 | 49% helix, 17% strand | K0IM51 |
Ligands and binding sites
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 374 | 0.68 | 0.80 | 41 | ACT |
Compared structures
- 5A62 · Hydrolytic potential of the ammonia-oxidizing Thaumarchaeon Nitrososphaera gargenis… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt K0IM51
- Elsewhere: RCSB PDB 5A62 · PDBe 5A62 · UniProt K0IM51
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