MolNFT v1 · #113037 · protein
2.5A structure of lysozyme determined by microed with data from a single crystal
5A3E · Lysozyme C: “2.5A structure of lysozyme determined by microed with data from a single crystal”. Electron crystallography, 1 pocket (best druggability 0.35). MolNFT v1 #113037 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 5A3E
- Type
- protein
- Length
- 128 residues
- Chains
- 1
- Method
- electron crystallography
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lysozyme C
- EC
- 3.2.1.17
- UniProt
- P00698
- Pockets
- 1 · best druggability 0.35
Structure
electron crystallography · 1 distinct chain · 41% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lysozyme C (EC 3.2.1.17) | protein | 128 | 41% helix, 11% strand | P00698 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 82 | 0.35 | 0.76 | 19 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Compared structures
- 5A3E · 2.5A structure of lysozyme determined by MicroED with data from a single crystal · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P00698
- Elsewhere: RCSB PDB 5A3E · PDBe 5A3E · UniProt P00698
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