MolNFT v1 · #112957 · protein
The crystal structure of ta-tfp, a thiocyanate-forming protein involved in glucosinolate breakdown (space group C2)
5A10 · Thiocyanate forming protein: “The crystal structure of ta-tfp, a thiocyanate-forming protein involved in glucosinolate breakdown (space…”. X-ray diffraction, 1 ligand (NA), 3 pockets (best druggability 0.62). MolNFT v1 #112957 on…
- PDB
- 5A10
- Type
- protein
- Length
- 352 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Thiocyanate forming protein
- UniProt
- G1FNI6
- Ligands
- NA
- Pockets
- 3 · best druggability 0.62
Structure
x-ray diffraction · 1 distinct chain · 0% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Thiocyanate forming protein | protein | 352 | 0% helix, 47% strand | G1FNI6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 267 | 0.62 | 0.80 | 44 | empty |
| 2 | 169 | 0.54 | 0.79 | 23 | ACT |
| 3 | 64 | 0.36 | 0.78 | 14 | empty |
Compared structures
- 5A10 · The crystal structure of Ta-TFP, a thiocyanate-forming protein involved in glucosinolate… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G1FNI6
- Elsewhere: RCSB PDB 5A10 · PDBe 5A10 · UniProt G1FNI6
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