MolNFT v1 · #112854 · protein
Crystal structure of a highly thermal stable but inactive levoglucosan kinase.
4ZXZ: “Crystal structure of a highly thermal stable but inactive levoglucosan kinase.”. X-ray diffraction, 12 pockets (best druggability 0.81). MolNFT v1 #112854 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4ZXZ
- Type
- protein
- Length
- 862 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Levoglucosan kinase
- Pockets
- 12 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Levoglucosan kinase | protein | 431 | 40% helix, 21% strand | — |
Pockets
12 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 153 | 0.81 | 0.97 | 26 | empty |
| 2 | 518 | 0.79 | 0.86 | 66 | empty |
| 3 | 456 | 0.79 | 0.87 | 73 | empty |
| 4 | 66 | 0.73 | 0.98 | 22 | empty |
| 5 | 66 | 0.73 | 0.98 | 25 | empty |
Interfaces
1 interface between chains.
- A–B · 2461 Ų buried · 44 hydrogen bonds · protein-protein
Compared structures
- 4ZXZ · Crystal structure of a highly thermal stable but inactive levoglucosan kinase. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4ZXZ · PDBe 4ZXZ
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