MolNFT v1 · #11282 · protein

Crystal structure analysis of the ABC transporter from thermotoga maritima

1JI0: “Crystal structure analysis of the ABC transporter from thermotoga maritima”. X-ray diffraction, 1 ligand (ATP), 2 pockets (best druggability 0.51). MolNFT v1 #11282 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 1JI0
Type: protein
Length: 240 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ABC transporter
UniProt: Q9X0M3
Ligands: ATP
Pockets: 2 · best druggability 0.51

Structure

x-ray diffraction · 1 distinct chain · 36% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ABC transporter	protein	240	36% helix, 28% strand	Q9X0M3

Ligands and binding sites

ATP · Adenosine-5'-triphosphate · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	208	0.51	0.76	30	empty
2	63	0.38	0.79	14	empty

Modifications

Observed in the structure: 9 modified (engineered).

Compared structures

1JI0 · Crystal Structure Analysis of the ABC transporter from Thermotoga maritima · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9X0M3
Elsewhere: RCSB PDB 1JI0 · PDBe 1JI0 · UniProt Q9X0M3

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