MolNFT v1 · #112530 · protein
X-ray structure of aav-2 origin binding domain
4ZO0 · Protein REP68: “X-ray structure of aav-2 origin binding domain”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #112530 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4ZO0
- Type
- protein
- Length
- 591 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein REP68
- EC
- 3.6.4.12
- UniProt
- P03132
- Ligands
- MG
Structure
x-ray diffraction · 3 distinct chains · 40% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein REP68 (EC 3.6.4.12) | protein | 202 | 44% helix, 17% strand | P03132 |
| B | Protein REP68 (EC 3.6.4.12) | protein | 198 | 40% helix, 18% strand | P03132 |
| C | Protein REP68 (EC 3.6.4.12) | protein | 191 | 37% helix, 18% strand | P03132 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 534 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 4ZO0 · X-ray Structure of AAV-2 Origin Binding Domain · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03132
- Elsewhere: RCSB PDB 4ZO0 · PDBe 4ZO0 · UniProt P03132
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