MolNFT v1 · #112514 · protein

Thermus phage P74-26 large terminase ATPase domain from (P 32 2 1 space group)

4ZNK · Phage terminase large subunit: “Thermus phage P74-26 large terminase ATPase domain from (P 32 2 1 space group)”. X-ray diffraction, 1 ligand (SO4), 1 pocket (best druggability 0.33). MolNFT v1 #112514 on GenesisL1: 3D structure…

PDB: 4ZNK
Type: protein
Length: 258 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phage terminase large subunit
UniProt: A7XXR1
Ligands: SO4
Pockets: 1 · best druggability 0.33

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phage terminase large subunit	protein	258	40% helix, 21% strand	A7XXR1

Ligands and binding sites

SO4 · Sulfate ion · ion · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.33	0.74	16	SO4

Compared structures

4ZNK · Thermus Phage P74-26 Large Terminase ATPase domain from (P 32 2 1 space group) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A7XXR1
Elsewhere: RCSB PDB 4ZNK · PDBe 4ZNK · UniProt A7XXR1

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