MolNFT v1 · #112370 · protein
Small heat shock protein agsa from salmonella typhimurium: C-terminal truncated construct
4ZJA · Aggregation suppressing protein: “Small heat shock protein agsa from salmonella typhimurium: C-terminal truncated construct”. X-ray diffraction, 5 pockets (best druggability 0.58). MolNFT v1 #112370 on GenesisL1: 3D structure…
- PDB
- 4ZJA
- Type
- protein
- Length
- 212 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Aggregation suppressing protein
- UniProt
- D1MC98
- Pockets
- 5 · best druggability 0.58
Structure
x-ray diffraction · 1 distinct chain · 3% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Aggregation suppressing protein | protein | 106 | 3% helix, 48% strand | D1MC98 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 114 | 0.58 | 0.84 | 23 | empty |
| 2 | 245 | 0.54 | 0.77 | 28 | empty |
| 3 | 219 | 0.48 | 0.74 | 25 | empty |
| 4 | 191 | 0.44 | 0.74 | 25 | empty |
| 5 | 52 | 0.37 | 0.79 | 18 | empty |
Interfaces
1 interface between chains.
- A–B · 1183 Ų buried · 25 hydrogen bonds · protein-protein
Compared structures
- 4ZJA · Small heat shock protein AgsA from Salmonella typhimurium: C-terminal truncated construct · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D1MC98
- Elsewhere: RCSB PDB 4ZJA · PDBe 4ZJA · UniProt D1MC98
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