MolNFT v1 · #112190 · protein

Crystal structure of core DNA binding domain of arabidopsis thaliana transcription factor ethylene-insensitive 3

4ZDS · Protein ethylene insensitive 3: “Crystal structure of core DNA binding domain of arabidopsis thaliana transcription factor…”. X-ray diffraction, 3 pockets (best druggability 0.46). MolNFT v1 #112190 on GenesisL1: 3D structure…

PDB: 4ZDS
Type: protein
Length: 261 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein ethylene insensitive 3
UniProt: O24606
Pockets: 3 · best druggability 0.46

Structure

x-ray diffraction · 2 distinct chains · 62% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein ethylene insensitive 3	protein	132	63% helix, 0% strand	O24606
B	Protein ethylene insensitive 3	protein	129	61% helix, 0% strand	O24606

Pockets

3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	172	0.46	0.76	34	empty
2	55	0.31	0.76	15	empty
3	51	0.29	0.75	15	empty

Interfaces

1 interface between chains.

A–B · 523 Å² buried · 8 hydrogen bonds · protein-protein

Compared structures

4ZDS · Crystal Structure of core DNA binding domain of Arabidopsis Thaliana Transcription Factor… · the same entry in another collection · chain A against A, TM-score 1.00
O24606 · AlphaFold monomer V2.0 prediction for protein ethylene insensitive 3 (O24606) · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O24606
Elsewhere: RCSB PDB 4ZDS · PDBe 4ZDS · UniProt O24606

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