MolNFT v1 · #111933 · protein
Crystal structure of apo-form of aldehyde deformylating oxygenase from synechocystis SP.PCC 6803
4Z5S · Aldehyde decarbonylase: “Crystal structure of apo-form of aldehyde deformylating oxygenase from synechocystis SP.PCC 6803”. X-ray diffraction, 2 pockets (best druggability 0.83). MolNFT v1 #111933 on GenesisL1: 3D structure, binding…
- PDB
- 4Z5S
- Type
- protein
- Length
- 223 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Aldehyde decarbonylase
- EC
- 4.1.99.5
- UniProt
- Q55688
- Pockets
- 2 · best druggability 0.83
Structure
x-ray diffraction · 1 distinct chain · 84% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Aldehyde decarbonylase (EC 4.1.99.5) | protein | 223 | 84% helix, 0% strand | Q55688 |
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 172 | 0.83 | 0.97 | 32 | empty |
| 2 | 124 | 0.46 | 0.78 | 25 | empty |
Compared structures
- 4Z5S · Crystal structure of apo-form of aldehyde deformylating oxygenase from Synechocystis… · the same entry in another collection · chain A against A, TM-score 1.00
- Q55688 · AlphaFold monomer V2.0 prediction for aldehyde decarbonylase (Q55688) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q55688
- Elsewhere: RCSB PDB 4Z5S · PDBe 4Z5S · UniProt Q55688
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