MolNFT v1 · #111851 · protein

Crystal structure of methyltransferase CALO6

4Z2Y: “Crystal structure of methyltransferase CALO6”. X-ray diffraction, 1 ligand (HG), 2 pockets (best druggability 0.56). MolNFT v1 #111851 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4Z2Y
Type: protein
Length: 299 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: CALO6
UniProt: Q8KND2
Ligands: HG
Pockets: 2 · best druggability 0.56

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 12% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	CALO6	protein	299	35% helix, 12% strand	Q8KND2

Ligands and binding sites

HG · Mercury (II) ion · metal · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	340	0.56	0.75	55	empty
2	211	0.45	0.73	29	HG

Compared structures

4Z2Y · Crystal structure of methyltransferase CalO6 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q8KND2
Elsewhere: RCSB PDB 4Z2Y · PDBe 4Z2Y · UniProt Q8KND2

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