GL1X · GenesisL1 explorer

MolNFT v1 · #111736 · protein

Humanized ROCO4 bound to compound 19

4YZN · Probable SERINE/THREONINE-protein kinase ROCO4: “Humanized ROCO4 bound to compound 19”. X-ray diffraction, 1 ligand (4K5), 1 pocket (best druggability 0.60). MolNFT v1 #111736 on GenesisL1: 3D structure, binding sites and pockets in…

PDB
4YZN
Type
protein
Length
269 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Probable SERINE/THREONINE-protein kinase ROCO4
EC
2.7.11.1
UniProt
Q6XHB2
Ligands
4K5
Pockets
1 · best druggability 0.60

Structure

x-ray diffraction · 1 distinct chain · 35% helix, 17% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AProbable SERINE/THREONINE-protein kinase ROCO4 (EC 2.7.11.1)protein26935% helix, 17% strandQ6XHB2

Ligands and binding sites

  • 4K5 · (4-{[4-(cyclopropylamino)-5-(trifluoromethyl)pyrimidin-2-yl]amino}-2-fluoro-5-methoxyphenyl)(morpholin-4-yl)methanone · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
12570.600.79324K5

Compared structures

  • 4YZN · Humanized Roco4 bound to Compound 19 · the same entry in another collection · chain A against A, TM-score 1.00
  • Q6XHB2 · AlphaFold monomer V2.0 prediction for probable SERINE/THREONINE- protein kinase ROCO4… · a predicted model of the same protein · chain A against A, TM-score 0.97

Analyse

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.