MolNFT v1 · #111683 · protein

Computationally designed left-handed ALPHA/ALPHA toroid with 3 repeats in space group P43212

4YY5 · DTOR_3X33L: “Computationally designed left-handed ALPHA/ALPHA toroid with 3 repeats in space group P43212”. X-ray diffraction, 1 pocket (best druggability 0.47). MolNFT v1 #111683 on GenesisL1: 3D structure, binding sites and…

PDB: 4YY5
Type: protein
Length: 196 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: DTOR_3X33L
Pockets: 1 · best druggability 0.47

Structure

x-ray diffraction · 2 distinct chains · 77% helix, 0% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	DTOR_3X33L	protein	97	78% helix, 0% strand	—
B	DTOR_3X33L	protein	99	75% helix, 0% strand	—

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	167	0.47	0.76	28	empty

Interfaces

1 interface between chains.

A–B · 586 Å² buried · 5 hydrogen bonds · protein-protein

Compared structures

4YY5 · Computationally designed left-handed alpha/alpha toroid with 3 repeats in space group… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 4YY5 · PDBe 4YY5

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