MolNFT v1 · #111309 · protein
The atomic structure of wiseana spp entomopoxvirus (wsepv) fusolin spindles
4YN2: “The atomic structure of wiseana spp entomopoxvirus (wsepv) fusolin spindles”. X-ray diffraction, 3 ligands (NAG, BMA, ZN), 1 pocket (best druggability 0.26). MolNFT v1 #111309 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 4YN2
- Type
- protein
- Length
- 281 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fusolin
- Ligands
- NAG, BMA, ZN
- Pockets
- 1 · best druggability 0.26
Structure
x-ray diffraction · 1 distinct chain · 26% helix, 26% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fusolin | protein | 281 | 26% helix, 26% strand | — |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 2 copies · chains A
- BMA · beta-D-mannopyranose · sugar · chains A
- ZN · Zinc ion · metal · chains A
- EDO · 1,2-ethanediol · additive · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 50 | 0.26 | 0.74 | 13 | empty |
Modifications
Observed in the structure: 2 disulfide, 1 glycan (disulfide, N-glycosylation).
Compared structures
- 4YN2 · The atomic structure of wiseana spp entomopoxvirus (wsepv) fusolin spindles · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4YN2 · PDBe 4YN2
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