MolNFT v1 · #111083 · protein
Structural basis of glycan recognition in neonate-specific rotaviruses
4YG3 · Outer capsid protein VP4: “Structural basis of glycan recognition in neonate-specific rotaviruses”. X-ray diffraction, 1 ligand (SO4). MolNFT v1 #111083 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4YG3
- Type
- protein
- Length
- 163 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer capsid protein VP4
- UniProt
- P35746
- Ligands
- SO4
Structure
x-ray diffraction · 1 distinct chain · 8% helix, 52% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer capsid protein VP4 | protein | 163 | 8% helix, 52% strand | P35746 |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 4YG3 · Structural basis of glycan recognition in neonate-specific rotaviruses · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P35746
- Elsewhere: RCSB PDB 4YG3 · PDBe 4YG3 · UniProt P35746
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