MolNFT v1 · #110619 · RNA
E.COLI 23S sarcin-ricil loop, modified with a 2-me on G2661 and a methylphosphonate on A2662
4Y27 · 27-mer 23S sarcin-ricil loop: “E.COLI 23S sarcin-ricil loop, modified with a 2-me on G2661 and a methylphosphonate on A2662”. X-ray diffraction, 1 pocket (best druggability 0.23). MolNFT v1 #110619 on GenesisL1: 3D structure…
- PDB
- 4Y27
- Type
- RNA
- Length
- 27 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 27-mer 23S sarcin-ricil loop
- Pockets
- 1 · best druggability 0.23
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 27-mer 23S sarcin-ricil loop | rna | 27 | — | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 57 | 0.23 | 0.72 | 12 | empty |
Modifications
Observed in the structure: 2 modified (nucleotide modification).
Compared structures
- 4Y27 · E.coli 23S Sarcin-Ricil Loop, modified with a 2-Me on G2661 and a methylphosphonate on… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4Y27 · PDBe 4Y27
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