MolNFT v1 · #110517 · protein
The crystal structure of erve virus nucleoprotein
4XZA: “The crystal structure of erve virus nucleoprotein”. X-ray diffraction, 4 pockets (best druggability 0.87). MolNFT v1 #110517 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4XZA
- Type
- protein
- Length
- 731 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nucleoprotein
- UniProt
- J3S7E7
- Pockets
- 4 · best druggability 0.87
Structure
x-ray diffraction · 2 distinct chains · 53% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nucleoprotein | protein | 366 | 54% helix, 6% strand | J3S7E7 |
| B | Nucleoprotein | protein | 365 | 53% helix, 6% strand | J3S7E7 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1034 | 0.87 | 0.89 | 103 | empty |
| 2 | 223 | 0.71 | 0.87 | 38 | empty |
| 3 | 241 | 0.66 | 0.84 | 37 | empty |
| 4 | 76 | 0.34 | 0.76 | 23 | empty |
Interfaces
1 interface between chains.
- A–B · 1045 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 4XZA · The crystal structure of Erve virus nucleoprotein · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J3S7E7
- Elsewhere: RCSB PDB 4XZA · PDBe 4XZA · UniProt J3S7E7
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.