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MolNFT v1 · #110360 · protein

Synthesis and evaluation of heterocyclic catechol mimics as inhibitors of catechol-O-methyltransferase (comt): structure with CMPD18 (1- (biphenyl-3-yl)-3-hydroxypyridin-4(1H)-one)

4XUC · Catechol O-methyltransferase: “Synthesis and evaluation of heterocyclic catechol mimics as inhibitors of catechol-O-methyltransferase…”. X-ray diffraction, 3 ligands (43G, SAM, MG), 1 pocket (best druggability 0.61). MolNFT v1…

PDB
4XUC
Type
protein
Length
218 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Catechol O-methyltransferase
EC
2.1.1.6
UniProt
P21964
Ligands
43G, SAM, MG
Pockets
1 · best druggability 0.61

Structure

x-ray diffraction · 1 distinct chain · 47% helix, 19% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ACatechol O-methyltransferase (EC 2.1.1.6)protein21847% helix, 19% strandP21964

Ligands and binding sites

  • 43G · 1-(biphenyl-3-yl)-3-hydroxypyridin-4(1H)-one · ligand · chains A
  • SAM · S-adenosylmethionine · ligand · chains A
  • MG · Magnesium ion · metal · chains A
  • MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
11540.610.843343G, SAM

Compared structures

  • 4XUC · Synthesis and evaluation of heterocyclic catechol mimics as inhibitors of… · the same entry in another collection · chain A against A, TM-score 1.00
  • P21964 · AlphaFold monomer V2.0 prediction for catechol O-methyltransferase (P21964) · a predicted model of the same protein · chain A against A, TM-score 0.97

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