MolNFT v1 · #109447 · protein
Structural view and substrate specificity of papain-like protease from avian infectious bronchitis virus
4X2Z · Nonstructural protein 3: “Structural view and substrate specificity of papain-like protease from avian infectious bronchitis virus”. X-ray diffraction, 1 ligand (ZN), 1 pocket (best druggability 0.26). MolNFT v1 #109447 on…
- PDB
- 4X2Z
- Type
- protein
- Length
- 301 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nonstructural protein 3
- EC
- 3.4.22.-
- UniProt
- P0C6Y1
- Ligands
- ZN
- Pockets
- 1 · best druggability 0.26
Structure
x-ray diffraction · 1 distinct chain · 25% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nonstructural protein 3 (EC 3.4.22.-) | protein | 301 | 25% helix, 35% strand | P0C6Y1 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 51 | 0.26 | 0.73 | 13 | empty |
Modifications
Observed in the structure: 1 modified (engineered).
Compared structures
- 4X2Z · Structural view and substrate specificity of papain-like protease from Avian Infectious… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0C6Y1
- Elsewhere: RCSB PDB 4X2Z · PDBe 4X2Z · UniProt P0C6Y1
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