MolNFT v1 · #109268 · protein
Sadc (300-487) from pseudomonas aeruginosa PAO1
4WXO · Uncharacterized protein: “Sadc (300-487) from pseudomonas aeruginosa PAO1”. X-ray diffraction, 4 pockets (best druggability 0.46). MolNFT v1 #109268 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4WXO
- Type
- protein
- Length
- 546 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein
- UniProt
- Q9HW69
- Pockets
- 4 · best druggability 0.46
Structure
x-ray diffraction · 1 distinct chain · 50% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | Uncharacterized protein | protein | 182 | 50% helix, 20% strand | Q9HW69 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 194 | 0.46 | 0.74 | 26 | empty |
| 2 | 170 | 0.43 | 0.73 | 24 | empty |
| 3 | 159 | 0.42 | 0.74 | 25 | empty |
| 4 | 50 | 0.29 | 0.76 | 13 | empty |
Interfaces
3 interfaces between chains.
- B–C · 152 Ų buried · 1 hydrogen bond · protein-protein
- A–B · 111 Ų buried · 0 hydrogen bonds · protein-protein
- A–C · 94 Ų buried · 0 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 15 modified (engineered).
Compared structures
- 4WXO · SadC (300-487) from Pseudomonas aeruginosa PAO1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9HW69
- Elsewhere: RCSB PDB 4WXO · PDBe 4WXO · UniProt Q9HW69
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