MolNFT v1 · #108895 · protein

Stationary phase survival protein yuic from B.SUBTILIS

4WLI: “Stationary phase survival protein yuic from B.SUBTILIS”. X-ray diffraction, 1 pocket (best druggability 0.44). MolNFT v1 #108895 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 4WLI
Type: protein
Length: 138 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Yuic
UniProt: O32108
Pockets: 1 · best druggability 0.44

Structure

x-ray diffraction · 1 distinct chain · 24% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Yuic	protein	138	24% helix, 21% strand	O32108

Ligands and binding sites

EDO · 1,2-ethanediol · additive · 4 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	140	0.44	0.76	18	empty

Compared structures

4WLI · Stationary Phase Survival Protein YuiC from B.subtilis · the same entry in another collection · chain A against A, TM-score 1.00
O32108 · AlphaFold monomer V2.0 prediction for uncharacterized protein yuic (O32108) · a predicted model of the same protein · chain A against A, TM-score 0.67

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O32108
Elsewhere: RCSB PDB 4WLI · PDBe 4WLI · UniProt O32108

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