MolNFT v1 · #108687 · protein
Apo yehz from escerichia COLI
4WEP · Putative osmoprotectant uptake system substrate-binding…: “Apo yehz from escerichia COLI”. X-ray diffraction, 4 pockets (best druggability 0.79). MolNFT v1 #108687 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4WEP
- Type
- protein
- Length
- 564 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative osmoprotectant uptake system substrate-binding protein osmf
- UniProt
- P33362
- Pockets
- 4 · best druggability 0.79
Structure
x-ray diffraction · 2 distinct chains · 49% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative osmoprotectant uptake system substrate-binding protein osmf | protein | 281 | 49% helix, 19% strand | P33362 |
| B | Putative osmoprotectant uptake system substrate-binding protein osmf | protein | 283 | 49% helix, 18% strand | P33362 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1134 | 0.79 | 0.80 | 103 | empty |
| 2 | 198 | 0.47 | 0.74 | 26 | empty |
| 3 | 139 | 0.46 | 0.77 | 24 | empty |
| 4 | 61 | 0.37 | 0.79 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 569 Ų buried · 9 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P33362
- Elsewhere: RCSB PDB 4WEP · PDBe 4WEP · UniProt P33362
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