MolNFT v1 · #108621 · protein
Structure of isolated D chain of gigant hemoglobin from glossoscolex paulistus
4WCH · Isolated chain D of gigant hemoglobin from glossoscolex…: “Structure of isolated D chain of gigant hemoglobin from glossoscolex paulistus”. X-ray diffraction, 2 ligands (HEM, OXY), 1 pocket (best druggability 0.73). MolNFT v1…
- PDB
- 4WCH
- Type
- protein
- Length
- 140 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Isolated chain D of gigant hemoglobin from glossoscolex paulistus
- Ligands
- HEM, OXY
- Pockets
- 1 · best druggability 0.73
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | Isolated chain D of gigant hemoglobin from glossoscolex paulistus | protein | 140 | 76% helix, 0% strand | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 266 | 0.73 | 0.86 | 26 | HEM, OXY |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 4WCH · Structure of Isolated D Chain of Gigant Hemoglobin from Glossoscolex paulistus · the same entry in another collection · chain D against D, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4WCH · PDBe 4WCH
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