MolNFT v1 · #108476 · protein
Dimeric BAP29 vded with disulfide bonds in crystal contacts
4W7Y · B-cell receptor-associated protein 29: “Dimeric BAP29 vded with disulfide bonds in crystal contacts”. X-ray diffraction. MolNFT v1 #108476 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4W7Y
- Type
- protein
- Length
- 128 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- B-cell receptor-associated protein 29
- UniProt
- Q9UHQ4
Structure
x-ray diffraction · 1 distinct chain · 92% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | B-cell receptor-associated protein 29 | protein | 64 | 92% helix, 0% strand | Q9UHQ4 |
Ligands and binding sites
- MPD · (4S)-2-methyl-2,4-pentanediol · additive · 2 copies · chains A, B
- ACT · Acetate ion · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 1581 Ų buried · 9 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 4W7Y · Dimeric BAP29 vDED with disulfide bonds in crystal contacts · the same entry in another collection · chain A against A, TM-score 1.00
- Q9UHQ4 · AlphaFold monomer V2.0 prediction for B-cell receptor-associated protein 29 (Q9UHQ4) · a predicted model of the same protein · chain A against A, TM-score 0.86
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UHQ4
- Elsewhere: RCSB PDB 4W7Y · PDBe 4W7Y · UniProt Q9UHQ4
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