MolNFT v1 · #108439 · protein
Crystal structure of a peptide transporter from yersinia enterocolitica at 3 a resolution
4W6V · Di-/tripeptide transporter: “Crystal structure of a peptide transporter from yersinia enterocolitica at 3 a resolution”. X-ray diffraction, 6 pockets (best druggability 0.76). MolNFT v1 #108439 on GenesisL1: 3D structure, binding…
- PDB
- 4W6V
- Type
- protein
- Length
- 483 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Di-/tripeptide transporter
- UniProt
- R9G739
- Pockets
- 6 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 76% helix, 1% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Di-/tripeptide transporter | protein | 483 | 76% helix, 1% strand | R9G739 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 676 | 0.76 | 0.81 | 54 | empty |
| 2 | 419 | 0.63 | 0.77 | 32 | empty |
| 3 | 157 | 0.51 | 0.78 | 26 | empty |
| 4 | 199 | 0.47 | 0.74 | 22 | empty |
| 5 | 94 | 0.38 | 0.76 | 18 | empty |
Compared structures
- 4W6V · Crystal structure of a peptide transporter from Yersinia enterocolitica at 3 A resolution · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt R9G739
- Elsewhere: RCSB PDB 4W6V · PDBe 4W6V · UniProt R9G739
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