MolNFT v1 · #108368 · protein
Crystal structure of ent-kaurene synthase bjks from bradyrhizobium japonicum
4W4R · Uncharacterized protein BLR2150: “Crystal structure of ent-kaurene synthase bjks from bradyrhizobium japonicum”. X-ray diffraction, 4 pockets (best druggability 0.82). MolNFT v1 #108368 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4W4R
- Type
- protein
- Length
- 546 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Uncharacterized protein BLR2150
- UniProt
- Q45222
- Pockets
- 4 · best druggability 0.82
Structure
x-ray diffraction · 2 distinct chains · 74% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Uncharacterized protein BLR2150 | protein | 270 | 75% helix, 0% strand | Q45222 |
| B | Uncharacterized protein BLR2150 | protein | 276 | 74% helix, 0% strand | Q45222 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1101 | 0.82 | 0.83 | 80 | empty |
| 2 | 325 | 0.73 | 0.85 | 42 | empty |
| 3 | 250 | 0.71 | 0.86 | 37 | empty |
| 4 | 75 | 0.39 | 0.78 | 17 | empty |
Interfaces
1 interface between chains.
- A–B · 1062 Ų buried · 14 hydrogen bonds · protein-protein
Compared structures
- 4W4R · Crystal structure of ent-kaurene synthase BJKS from bradyrhizobium japonicum · the same entry in another collection · chain A against A, TM-score 1.00
- Q45222 · AlphaFold monomer V2.0 prediction for uncharacterized protein BLR2150 (Q45222) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q45222
- Elsewhere: RCSB PDB 4W4R · PDBe 4W4R · UniProt Q45222
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