MolNFT v1 · #108301 · protein
Apo-structure of ALPHA2,3-sialyltransferase from pasteurella dagmatis
4V2U: “Apo-structure of ALPHA2,3-sialyltransferase from pasteurella dagmatis”. X-ray diffraction, 3 pockets (best druggability 0.52). MolNFT v1 #108301 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4V2U
- Type
- protein
- Length
- 386 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Sialyltransferase
- UniProt
- K9UUI6
- Pockets
- 3 · best druggability 0.52
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Sialyltransferase | protein | 386 | 43% helix, 18% strand | K9UUI6 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 219 | 0.52 | 0.76 | 41 | empty |
| 2 | 86 | 0.36 | 0.76 | 14 | empty |
| 3 | 57 | 0.30 | 0.75 | 15 | empty |
Compared structures
- 4V2U · Apo-structure of alpha2,3-sialyltransferase from Pasteurella dagmatis · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt K9UUI6
- Elsewhere: RCSB PDB 4V2U · PDBe 4V2U · UniProt K9UUI6
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