MolNFT v1 · #107617 · protein
Laboratory evolved variant R-C1B1D33E6 of potato epoxide hydrolase STEH1
4UFO: “Laboratory evolved variant R-C1B1D33E6 of potato epoxide hydrolase STEH1”. X-ray diffraction, 4 pockets (best druggability 0.82). MolNFT v1 #107617 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4UFO
- Type
- protein
- Length
- 641 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Epoxide hydrolase
- EC
- 3.3.2.3
- UniProt
- Q41415
- Pockets
- 4 · best druggability 0.82
Structure
x-ray diffraction · 2 distinct chains · 44% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Epoxide hydrolase (EC 3.3.2.3) | protein | 321 | 44% helix, 16% strand | Q41415 |
| B | Epoxide hydrolase (EC 3.3.2.3) | protein | 320 | 44% helix, 16% strand | Q41415 |
Pockets
4 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 595 | 0.82 | 0.87 | 67 | empty |
| 2 | 502 | 0.82 | 0.88 | 61 | empty |
| 3 | 438 | 0.66 | 0.78 | 54 | empty |
| 4 | 51 | 0.31 | 0.76 | 11 | empty |
Interfaces
1 interface between chains.
- A–B · 562 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
- 4UFO · Laboratory evolved variant R-C1B1D33E6 of potato epoxide hydrolase StEH1 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q41415
- Elsewhere: RCSB PDB 4UFO · PDBe 4UFO · UniProt Q41415
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