MolNFT v1 · #107395 · DNA
Crystal structure of a DNA/BA2+ G-quadruplex containing a water- mediated C-tetrad
4U92 · DNA (5'-D(*CP*CP*AP*KP*GP*CP*GP*TP*GP*G)-3'): “Crystal structure of a DNA/BA2+ G-quadruplex containing a water- mediated C-tetrad”. X-ray diffraction, 2 ligands (BA, MG). MolNFT v1 #107395 on GenesisL1: 3D structure, binding sites…
- PDB
- 4U92
- Type
- DNA
- Length
- 12 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA (5'-D(*CP*CP*AP*KP*GP*CP*GP*TP*GP*G)-3')
- Ligands
- BA, MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | DNA (5'-D(*CP*CP*AP*KP*GP*CP*GP*TP*GP*G)-3') | dna | 6 | — | — |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- A–B · 168 Ų buried · 2 hydrogen bonds · nucleic-nucleic
Compared structures
- 4U92 · Crystal structure of a DNA/Ba2+ G-quadruplex containing a water-mediated C-tetrad · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4U92 · PDBe 4U92
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