MolNFT v1 · #107377 · protein
Crystal structure of 2-keto-3-deoxy-D-gluconate dehydrogenase from streptococcus agalactiae
4U8G · Putative uncharacterized protein GBS1891: “Crystal structure of 2-keto-3-deoxy-D-gluconate dehydrogenase from streptococcus agalactiae”. X-ray diffraction, 1 pocket (best druggability 0.74). MolNFT v1 #107377 on GenesisL1: 3D…
- PDB
- 4U8G
- Type
- protein
- Length
- 266 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative uncharacterized protein GBS1891
- UniProt
- Q8E370
- Pockets
- 1 · best druggability 0.74
Structure
x-ray diffraction · 1 distinct chain · 47% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative uncharacterized protein GBS1891 | protein | 266 | 47% helix, 15% strand | Q8E370 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 772 | 0.74 | 0.79 | 62 | empty |
Compared structures
- 4U8G · Crystal structure of 2-keto-3-deoxy-D-gluconate dehydrogenase from Streptococcus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8E370
- Elsewhere: RCSB PDB 4U8G · PDBe 4U8G · UniProt Q8E370
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