MolNFT v1 · #107208 · RNA
Crystal structures of RNA duplexes containing 2-thio-uridine
4U34 · RNA (5'-R(*UP*AP*GP*CP*(SUR)P*CP*C-3'): “Crystal structures of RNA duplexes containing 2-thio-uridine”. X-ray diffraction. MolNFT v1 #107208 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4U34
- Type
- RNA
- Length
- 14 nucleotides
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- RNA (5'-R(*UP*AP*GP*CP*(SUR)P*CP*C-3'); RNA (5'-R(*GP*GP*AP*GP*CP*UP*A)-3')
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA (5'-R(*UP*AP*GP*CP*(SUR)P*CP*C-3') | rna | 7 | — | — |
| B | RNA (5'-R(*GP*GP*AP*GP*CP*UP*A)-3') | rna | 7 | — | — |
Interfaces
1 interface between chains.
- A–B · 335 Ų buried · 24 hydrogen bonds · nucleic-nucleic
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 4U34 · Crystal Structures of RNA Duplexes Containing 2-thio-Uridine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 4U34 · PDBe 4U34
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