MolNFT v1 · #107118 · protein
Hexameric HIV-1 ca in complex with NUP153 peptide, P6 crystal form
4U0C · Capsid protein P24: “Hexameric HIV-1 ca in complex with NUP153 peptide, P6 crystal form”. X-ray diffraction. MolNFT v1 #107118 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4U0C
- Type
- protein
- Length
- 219 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Capsid protein P24; Nuclear pore complex protein NUP153
- UniProt
- P12493, P49790
Structure
x-ray diffraction · 2 distinct chains · 56% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Capsid protein P24 | protein | 210 | 58% helix, 3% strand | P12493 |
| B | Nuclear pore complex protein NUP153 | protein | 9 | 0% helix, 0% strand | P49790 |
Interfaces
1 interface between chains.
- A–B · 316 Ų buried · 3 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 4U0C · Hexameric HIV-1 CA in complex with Nup153 peptide, P6 crystal form · the same entry in another collection · chain A against A, TM-score 1.00
- P49790 · AlphaFold monomer V2.0 prediction for nuclear pore complex protein NUP153 (P49790) · a predicted model of the same protein · chain B against A, TM-score 0.39
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P12493
- Every structure of UniProt P49790
- Elsewhere: RCSB PDB 4U0C · PDBe 4U0C · UniProt P12493 · UniProt P49790
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