MolNFT v1 · #107071 · protein

Ensemble refinement of the E502A variant of SACTELAM55A from streptomyces sp. sirexaa-E in complex with laminaritriose

4TZ1 · Putative secreted protein: “Ensemble refinement of the E502A variant of SACTELAM55A from streptomyces sp. sirexaa-E in complex with…”. X-ray diffraction, 1 ligand (BGC), 3 pockets (best druggability 0.76). MolNFT v1 #107071 on…

PDB: 4TZ1
Type: protein
Length: 549 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative secreted protein
UniProt: G2NFJ9
Ligands: BGC
Pockets: 3 · best druggability 0.76

Structure

x-ray diffraction · 1 distinct chain · 6% helix, 44% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative secreted protein	protein	549	6% helix, 44% strand	G2NFJ9

Ligands and binding sites

BGC · beta-D-glucopyranose · sugar · 6 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	80	0.76	0.99	28	empty
2	206	0.58	0.80	29	BGC
3	55	0.33	0.77	15	empty

Compared structures

4TZ1 · Ensemble refinement of the E502A variant of sacteLam55A from Streptomyces sp. SirexAA-E… · the same entry in another collection · chain A against A, TM-score 1.00
G2NFJ9 · AlphaFold monomer V2.0 prediction for exo-beta-1,3-glucanase (G2NFJ9) · a predicted model of the same protein · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G2NFJ9
Elsewhere: RCSB PDB 4TZ1 · PDBe 4TZ1 · UniProt G2NFJ9

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