MolNFT v1 · #10701 · protein
Crystal structure analysis of macrophomate synthase
1IZC · Macrophomate synthase intermolecular diels-alderase: “Crystal structure analysis of macrophomate synthase”. X-ray diffraction, 2 ligands (PYR, MG), 3 pockets (best druggability 0.64). MolNFT v1 #10701 on GenesisL1: 3D structure…
- PDB
- 1IZC
- Type
- protein
- Length
- 299 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Macrophomate synthase intermolecular diels-alderase
- UniProt
- Q9UVD4
- Ligands
- PYR, MG
- Pockets
- 3 · best druggability 0.64
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Macrophomate synthase intermolecular diels-alderase | protein | 299 | 45% helix, 14% strand | Q9UVD4 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 442 | 0.64 | 0.77 | 43 | MG, PYR |
| 2 | 53 | 0.38 | 0.80 | 12 | empty |
| 3 | 52 | 0.34 | 0.78 | 11 | empty |
Compared structures
- 1IZC · Crystal Structure Analysis of Macrophomate synthase · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9UVD4
- Elsewhere: RCSB PDB 1IZC · PDBe 1IZC · UniProt Q9UVD4
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