MolNFT v1 · #107001 · protein
Structure of udp-glucose 4-epimerase from brucella abortus
4TWR · NAD binding SITE:NAD-dependent EPIMERASE/DEHYDRATASE:UDP…: “Structure of udp-glucose 4-epimerase from brucella abortus”. X-ray diffraction, 2 ligands (NAD, ZN), 1 pocket (best druggability 0.81). MolNFT v1 #107001 on GenesisL1: 3D…
- PDB
- 4TWR
- Type
- protein
- Length
- 325 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- NAD binding SITE:NAD-dependent EPIMERASE/DEHYDRATASE:UDP- glucose 4-epimerase
- EC
- 5.1.3.2
- UniProt
- Q2YKG6
- Ligands
- NAD, ZN
- Pockets
- 1 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 40% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | NAD binding SITE:NAD-dependent EPIMERASE/DEHYDRATASE:UDP- glucose 4-epimerase (EC 5.1.3.2) | protein | 325 | 40% helix, 17% strand | Q2YKG6 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 882 | 0.81 | 0.84 | 81 | NAD |
Compared structures
- 4TWR · Structure of UDP-glucose 4-epimerase from Brucella abortus · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q2YKG6
- Elsewhere: RCSB PDB 4TWR · PDBe 4TWR · UniProt Q2YKG6
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