MolNFT v1 · #106802 · protein
Structural basis of specific recognition of non-reducing terminal N- acetylglucosamine by an agrocybe aegerita lection
4TQJ · Lectin 2: “Structural basis of specific recognition of non-reducing terminal N- acetylglucosamine by an agrocybe…”. X-ray diffraction, 7 pockets (best druggability 0.81). MolNFT v1 #106802 on GenesisL1: 3D structure, binding sites…
- PDB
- 4TQJ
- Type
- protein
- Length
- 806 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Lectin 2
- UniProt
- H6CS64
- Pockets
- 7 · best druggability 0.81
Structure
x-ray diffraction · 1 distinct chain · 1% helix, 37% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Lectin 2 | protein | 403 | 1% helix, 37% strand | H6CS64 |
Pockets
7 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 892 | 0.81 | 0.83 | 64 | empty |
| 2 | 1050 | 0.81 | 0.82 | 70 | empty |
| 3 | 453 | 0.71 | 0.81 | 53 | empty |
| 4 | 341 | 0.68 | 0.82 | 46 | empty |
| 5 | 77 | 0.40 | 0.78 | 20 | empty |
Interfaces
1 interface between chains.
- A–B · 982 Ų buried · 17 hydrogen bonds · protein-protein
Compared structures
- 4TQJ · Structural basis of specific recognition of non-reducing terminal N-acetylglucosamine by… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt H6CS64
- Elsewhere: RCSB PDB 4TQJ · PDBe 4TQJ · UniProt H6CS64
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