MolNFT v1 · #106438 · protein
Crystal structure of the mind-like ATPase flhg
4RZ3 · Site-determining protein: “Crystal structure of the mind-like ATPase flhg”. X-ray diffraction, 1 ligand (ADP), 3 pockets (best druggability 0.85). MolNFT v1 #106438 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4RZ3
- Type
- protein
- Length
- 488 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Site-determining protein
- UniProt
- A4IMB4
- Ligands
- ADP
- Pockets
- 3 · best druggability 0.85
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Site-determining protein | protein | 244 | 45% helix, 18% strand | A4IMB4 |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1161 | 0.85 | 0.86 | 116 | ADP |
| 2 | 140 | 0.46 | 0.77 | 31 | empty |
| 3 | 127 | 0.45 | 0.77 | 31 | empty |
Interfaces
1 interface between chains.
- A–B · 1400 Ų buried · 15 hydrogen bonds · protein-protein
Compared structures
- 4RZ3 · Crystal structure of the MinD-like ATPase FlhG · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4IMB4
- Elsewhere: RCSB PDB 4RZ3 · PDBe 4RZ3 · UniProt A4IMB4
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