MolNFT v1 · #10641 · protein

Crystal structure of spoob from bacillus subtilis

1IXM · Protein (sporulation response regulatory protein): “Crystal structure of spoob from bacillus subtilis”. X-ray diffraction, 1 pocket (best druggability 0.79). MolNFT v1 #10641 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 1IXM
Type: protein
Length: 343 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (sporulation response regulatory protein)
UniProt: P06535
Pockets: 1 · best druggability 0.79

Structure

x-ray diffraction · 2 distinct chains · 50% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (sporulation response regulatory protein)	protein	168	51% helix, 21% strand	P06535
B	Protein (sporulation response regulatory protein)	protein	175	49% helix, 21% strand	P06535

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	679	0.79	0.83	51	empty

Interfaces

1 interface between chains.

A–B · 1636 Å² buried · 4 hydrogen bonds · protein-protein

Compared structures

1IXM · Crystal structure of spoob from bacillus subtilis · the same entry in another collection · chain A against A, TM-score 1.00
P06535 · AlphaFold monomer V2.0 prediction for sporulation initiation phosphotransferase B (P06535) · a predicted model of the same protein · chain A against A, TM-score 0.98

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P06535
Elsewhere: RCSB PDB 1IXM · PDBe 1IXM · UniProt P06535

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