MolNFT v1 · #10636 · protein
Phosphate-binding protein (pbp) complexed with phosphate
1IXH: “Phosphate-binding protein (pbp) complexed with phosphate”. X-ray diffraction, 1 ligand (PO4), 2 pockets (best druggability 0.37). MolNFT v1 #10636 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1IXH
- Type
- protein
- Length
- 321 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phosphate-binding protein
- UniProt
- P06128
- Ligands
- PO4
- Pockets
- 2 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 39% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phosphate-binding protein | protein | 321 | 39% helix, 22% strand | P06128 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 52 | 0.37 | 0.80 | 15 | empty |
| 2 | 50 | 0.36 | 0.80 | 12 | empty |
Compared structures
- 1IXH · Phosphate-binding protein (pbp) complexed with phosphate · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P06128
- Elsewhere: RCSB PDB 1IXH · PDBe 1IXH · UniProt P06128
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