MolNFT v1 · #105757 · protein

Crystal structure of udp-glucose: anthocyanidin 3-O- glucosyltransferase in complex with delphinidin

4REM · Udp-GLUCOSE:ANTHOCYANIDIN 3-O-glucosyltransferase: “Crystal structure of udp-glucose: anthocyanidin 3-O- glucosyltransferase in complex with delphinidin”. X-ray diffraction, 1 ligand (DLM), 2 pockets (best druggability 0.78). MolNFT…

PDB: 4REM
Type: protein
Length: 446 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Udp-GLUCOSE:ANTHOCYANIDIN 3-O-glucosyltransferase
EC: 2.4.1.115
UniProt: A4F1R4
Ligands: DLM
Pockets: 2 · best druggability 0.78

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 14% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Udp-GLUCOSE:ANTHOCYANIDIN 3-O-glucosyltransferase (EC 2.4.1.115)	protein	446	45% helix, 14% strand	A4F1R4

Ligands and binding sites

DLM · 3,5,7-trihydroxy-2-(3,4,5-trihydroxyphenyl)chromenium · ligand · chains A
GOL · Glycerol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	1191	0.78	0.79	119	DLM, GOL
2	80	0.31	0.73	13	empty

Compared structures

4REM · Crystal structure of UDP-glucose: anthocyanidin 3-O-glucosyltransferase in complex with… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A4F1R4
Elsewhere: RCSB PDB 4REM · PDBe 4REM · UniProt A4F1R4

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.