MolNFT v1 · #105753 · protein

Crystal structure of ginseng major latex-like protein 151 (glp) from panax ginseng. (crystal-2)

4REI: “Crystal structure of ginseng major latex-like protein 151 (glp) from panax ginseng. (crystal-2)”. X-ray diffraction, 1 ligand (3MV), 1 pocket (best druggability 0.79). MolNFT v1 #105753 on GenesisL1: 3D structure, binding sites and…

PDB: 4REI
Type: protein
Length: 146 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Major latex-like protein
UniProt: B5THI3
Ligands: 3MV
Pockets: 1 · best druggability 0.79

Structure

x-ray diffraction · 1 distinct chain · 27% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Major latex-like protein	protein	146	27% helix, 47% strand	B5THI3

Ligands and binding sites

3MV · (3R,5R)-3-ethyl-2,5-dimethylheptane · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	84	0.79	0.99	16	3MV

Compared structures

4REI · Crystal structure of ginseng major latex-like protein 151 (GLP) from Panax ginseng.… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B5THI3
Elsewhere: RCSB PDB 4REI · PDBe 4REI · UniProt B5THI3

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