MolNFT v1 · #105649 · protein
Crystal structure of magnetospirillum gryphiswaldense msr-1 semet-apo- fur
4RB0 · DNA-binding transcriptional dual regulator of siderophore…: “Crystal structure of magnetospirillum gryphiswaldense msr-1 semet-apo- fur”. X-ray diffraction, 1 ligand (SO4), 2 pockets (best druggability 0.40). MolNFT v1 #105649 on…
- PDB
- 4RB0
- Type
- protein
- Length
- 268 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DNA-binding transcriptional dual regulator of siderophore biosynthesis and TRANSPORT(FUR…
- UniProt
- V6F4Q0
- Ligands
- SO4
- Pockets
- 2 · best druggability 0.40
Structure
x-ray diffraction · 2 distinct chains · 43% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding transcriptional dual regulator of siderophore biosynthesis and TRANSPORT(FUR family) | protein | 135 | 43% helix, 24% strand | V6F4Q0 |
| B | DNA-binding transcriptional dual regulator of siderophore biosynthesis and TRANSPORT(FUR family) | protein | 133 | 43% helix, 23% strand | V6F4Q0 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 153 | 0.40 | 0.73 | 27 | SO4 |
| 2 | 58 | 0.34 | 0.78 | 15 | empty |
Interfaces
1 interface between chains.
- A–B · 1615 Ų buried · 26 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 5 modified (engineered).
Compared structures
- 4RB0 · Crystal structure of Magnetospirillum gryphiswaldense MSR-1 SeMet-Apo-Fur · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt V6F4Q0
- Elsewhere: RCSB PDB 4RB0 · PDBe 4RB0 · UniProt V6F4Q0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.