MolNFT v1 · #105633 · protein
Crystal structure of heme oxygenase 2 from chlamydomonas reinhardtii without heme.
4RAJ: “Crystal structure of heme oxygenase 2 from chlamydomonas reinhardtii without heme.”. X-ray diffraction, 2 pockets (best druggability 0.79). MolNFT v1 #105633 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 4RAJ
- Type
- protein
- Length
- 216 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Heme oxygenase
- EC
- 1.14.99.3
- UniProt
- A8JBZ0
- Pockets
- 2 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 78% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Heme oxygenase (EC 1.14.99.3) | protein | 216 | 78% helix, 0% strand | A8JBZ0 |
Ligands and binding sites
- PG6 · 1-(2-methoxy-ethoxy)-2-{2-[2-(2-methoxy-ethoxy]-ethoxy}-ethane · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 467 | 0.79 | 0.87 | 44 | PG6 |
| 2 | 57 | 0.41 | 0.81 | 16 | empty |
Compared structures
- 4RAJ · Crystal structure of heme oxygenase 2 from Chlamydomonas reinhardtii without heme. · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8JBZ0
- Elsewhere: RCSB PDB 4RAJ · PDBe 4RAJ · UniProt A8JBZ0
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.