MolNFT v1 · #105584 · protein
Structure of the nickase domain of NS1 from mvm complexed with magnesium
4R94 · Non-structural protein NS1: “Structure of the nickase domain of NS1 from mvm complexed with magnesium”. X-ray diffraction, 1 ligand (MG), 1 pocket (best druggability 0.40). MolNFT v1 #105584 on GenesisL1: 3D structure, binding sites…
- PDB
- 4R94
- Type
- protein
- Length
- 248 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Non-structural protein NS1
- UniProt
- P03134
- Ligands
- MG
- Pockets
- 1 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 45% helix, 20% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Non-structural protein NS1 | protein | 248 | 45% helix, 20% strand | P03134 |
Ligands and binding sites
- MG · Magnesium ion · metal · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 76 | 0.40 | 0.79 | 14 | empty |
Compared structures
- 4R94 · Structure of the nickase domain of NS1 from MVM complexed with magnesium · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P03134
- Elsewhere: RCSB PDB 4R94 · PDBe 4R94 · UniProt P03134
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