MolNFT v1 · #105542 · protein
Crystal structure of N-lobe of human ARRDC3(1-180)
4R7X · Arrestin domain-containing protein 3: “Crystal structure of N-lobe of human ARRDC3(1-180)”. X-ray diffraction, 1 ligand (PO4), 1 pocket (best druggability 0.70). MolNFT v1 #105542 on GenesisL1: 3D structure, binding sites and…
- PDB
- 4R7X
- Type
- protein
- Length
- 299 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Arrestin domain-containing protein 3
- UniProt
- Q96B67
- Ligands
- PO4
- Pockets
- 1 · best druggability 0.70
Structure
x-ray diffraction · 2 distinct chains · 0% helix, 67% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Arrestin domain-containing protein 3 | protein | 150 | 0% helix, 68% strand | Q96B67 |
| B | Arrestin domain-containing protein 3 | protein | 149 | 0% helix, 66% strand | Q96B67 |
Ligands and binding sites
- PO4 · Phosphate ion · ion · 11 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 435 | 0.70 | 0.82 | 65 | PO4 |
Interfaces
1 interface between chains.
- A–B · 1399 Ų buried · 29 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96B67
- Elsewhere: RCSB PDB 4R7X · PDBe 4R7X · UniProt Q96B67
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