MolNFT v1 · #10536 · protein

The structure of TT1380 protein from thermus thermophilus

1IUJ · Hypothetical protein TT1380: “The structure of TT1380 protein from thermus thermophilus”. X-ray diffraction, 1 ligand (ZN), 2 pockets (best druggability 0.61). MolNFT v1 #10536 on GenesisL1: 3D structure, binding sites and pockets…

PDB: 1IUJ
Type: protein
Length: 205 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Hypothetical protein TT1380
UniProt: P83693
Ligands: ZN
Pockets: 2 · best druggability 0.61

Structure

x-ray diffraction · 2 distinct chains · 33% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Hypothetical protein TT1380	protein	102	31% helix, 34% strand	P83693
B	Hypothetical protein TT1380	protein	103	34% helix, 34% strand	P83693

Ligands and binding sites

ZN · Zinc ion · metal · 7 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	82	0.61	0.89	29	ZN
2	158	0.59	0.83	31	ZN

Interfaces

1 interface between chains.

A–B · 1628 Å² buried · 29 hydrogen bonds · protein-protein

Compared structures

1IUJ · The structure of TT1380 protein from thermus thermophilus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P83693
Elsewhere: RCSB PDB 1IUJ · PDBe 1IUJ · UniProt P83693

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