MolNFT v1 · #105354 · protein

Crystal structure of sugar transporter ACHL_0255 from arthrobacter chlorophenolicus A6, target efi-510633, with bound laminaribiose

4R2F · Extracellular solute-binding protein family 1: “Crystal structure of sugar transporter ACHL_0255 from arthrobacter chlorophenolicus A6, target efi-510633…”. X-ray diffraction, 1 ligand (BGC), 3 pockets (best druggability 0.75).…

PDB: 4R2F
Type: protein
Length: 394 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Extracellular solute-binding protein family 1
UniProt: B8H997
Ligands: BGC
Pockets: 3 · best druggability 0.75

Structure

x-ray diffraction · 1 distinct chain · 46% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Extracellular solute-binding protein family 1	protein	394	46% helix, 15% strand	B8H997

Ligands and binding sites

BGC · beta-D-glucopyranose · sugar · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	229	0.75	0.90	36	BGC
2	204	0.49	0.75	33	empty
3	70	0.37	0.78	18	empty

Compared structures

4R2F · Crystal structure of sugar transporter ACHL_0255 from Arthrobacter chlorophenolicus A6… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt B8H997
Elsewhere: RCSB PDB 4R2F · PDBe 4R2F · UniProt B8H997

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