MolNFT v1 · #105140 · protein
2.1 ångström resolution crystal structure of S-layer domain-containing protein (residues 221-444) from clostridium thermocellum atcc 27405
4QVS: “2.1 ångström resolution crystal structure of S-layer domain-containing protein (residues 221-444) from…”. X-ray diffraction, 2 ligands (NA, CL), 2 pockets (best druggability 0.71). MolNFT v1 #105140 on GenesisL1: 3D structure…
- PDB
- 4QVS
- Type
- protein
- Length
- 217 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- S-layer domain-containing protein
- UniProt
- A3DIC9
- Ligands
- NA, CL
- Pockets
- 2 · best druggability 0.71
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 27% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | S-layer domain-containing protein | protein | 217 | 6% helix, 27% strand | A3DIC9 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 823 | 0.71 | 0.77 | 58 | empty |
| 2 | 216 | 0.50 | 0.75 | 29 | empty |
Modifications
Observed in the structure: 4 modified (engineered).
Compared structures
- 4QVS · 2.1 Angstrom resolution crystal structure of S-layer domain-containing protein (residues… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3DIC9
- Elsewhere: RCSB PDB 4QVS · PDBe 4QVS · UniProt A3DIC9
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