MolNFT v1 · #105023 · protein

Crystal structure of ATU4361 sugar transporter from agrobacterium fabrum C58, target efi-510558, with bound sucrose

4QSD · ABC-type sugar transporter: “Crystal structure of ATU4361 sugar transporter from agrobacterium fabrum C58, target efi-510558, with bound…”. X-ray diffraction, 2 ligands (GLC, FRU), 2 pockets (best druggability 0.75). MolNFT v1…

PDB: 4QSD
Type: protein
Length: 382 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: ABC-type sugar transporter
UniProt: A9CGI0
Ligands: GLC, FRU
Pockets: 2 · best druggability 0.75

Structure

x-ray diffraction · 1 distinct chain · 48% helix, 17% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	ABC-type sugar transporter	protein	382	48% helix, 17% strand	A9CGI0

Ligands and binding sites

GLC · alpha-D-glucopyranose · sugar · 3 copies · chains A
FRU · beta-D-fructofuranose · sugar · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	480	0.75	0.84	40	GLC, FRU
2	104	0.43	0.77	21	empty

Compared structures

4QSD · Crystal structure of atu4361 sugar transporter from Agrobacterium Fabrum C58, target… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A9CGI0
Elsewhere: RCSB PDB 4QSD · PDBe 4QSD · UniProt A9CGI0

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